Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Mir449b-201ENSMUST00000104833 80 ntBASIC11.96□□□□□ -0.49
Atf1P81269 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Atf1P81269 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.96□□□□□ -0.49
Atf1P81269 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.96□□□□□ -0.49
Atf1P81269 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 Gm6415-201ENSMUST00000118488 348 ntBASIC11.96□□□□□ -0.49
Atf1P81269 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.96□□□□□ -0.49
Atf1P81269 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.96□□□□□ -0.49
Atf1P81269 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Atf1P81269 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Atf1P81269 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.96□□□□□ -0.49
Atf1P81269 Gm28630-201ENSMUST00000187806 498 ntBASIC11.96□□□□□ -0.49
Atf1P81269 Gm33320-201ENSMUST00000192232 530 ntBASIC11.96□□□□□ -0.49
Atf1P81269 Gm5312-201ENSMUST00000203728 547 ntBASIC11.96□□□□□ -0.49
Atf1P81269 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.96□□□□□ -0.49
Atf1P81269 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Atf1P81269 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Atf1P81269 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Atf1P81269 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atf1P81269 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Atf1P81269 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atf1P81269 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atf1P81269 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Atf1P81269 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Atf1P81269 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.96□□□□□ -0.5
Atf1P81269 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atf1P81269 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.95□□□□□ -0.5
Atf1P81269 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.95□□□□□ -0.5
Atf1P81269 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atf1P81269 Gm8410-201ENSMUST00000117225 605 ntBASIC11.95□□□□□ -0.5
Atf1P81269 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Gm15693-201ENSMUST00000120470 637 ntBASIC11.95□□□□□ -0.5
Atf1P81269 Mir1897-201ENSMUST00000122581 272 ntBASIC11.95□□□□□ -0.5
Atf1P81269 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.95□□□□□ -0.5
Atf1P81269 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.95□□□□□ -0.5
Atf1P81269 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.95□□□□□ -0.5
Atf1P81269 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atf1P81269 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Atf1P81269 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.95□□□□□ -0.5
Atf1P81269 Gm44719-201ENSMUST00000206404 149 ntBASIC11.95□□□□□ -0.5
Atf1P81269 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.95□□□□□ -0.5
Atf1P81269 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atf1P81269 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atf1P81269 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.95□□□□□ -0.5
Atf1P81269 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.95□□□□□ -0.5
Atf1P81269 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atf1P81269 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.95□□□□□ -0.5
Atf1P81269 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.94□□□□□ -0.5
Atf1P81269 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Atf1P81269 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.94□□□□□ -0.5
Atf1P81269 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.94□□□□□ -0.5
Atf1P81269 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.94□□□□□ -0.5
Atf1P81269 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.94□□□□□ -0.5
Atf1P81269 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.94□□□□□ -0.5
Atf1P81269 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.94□□□□□ -0.5
Atf1P81269 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atf1P81269 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms