Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.92□□□□□ -0.02
CiitaP79621 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.92□□□□□ -0.02
CiitaP79621 Gm18187-201ENSMUST00000196476 984 ntBASIC14.92□□□□□ -0.02
CiitaP79621 Gm6983-201ENSMUST00000214912 628 ntBASIC14.92□□□□□ -0.02
CiitaP79621 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.92□□□□□ -0.02
CiitaP79621 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.92□□□□□ -0.02
CiitaP79621 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CiitaP79621 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.92□□□□□ -0.02
CiitaP79621 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CiitaP79621 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CiitaP79621 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.91□□□□□ -0.02
CiitaP79621 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.91□□□□□ -0.02
CiitaP79621 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CiitaP79621 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.91□□□□□ -0.02
CiitaP79621 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.91□□□□□ -0.02
CiitaP79621 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.91□□□□□ -0.02
CiitaP79621 Gm38223-201ENSMUST00000194484 695 ntBASIC14.91□□□□□ -0.02
CiitaP79621 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.91□□□□□ -0.02
CiitaP79621 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CiitaP79621 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.91□□□□□ -0.02
CiitaP79621 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CiitaP79621 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.91□□□□□ -0.02
CiitaP79621 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CiitaP79621 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.9□□□□□ -0.02
CiitaP79621 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CiitaP79621 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.9□□□□□ -0.02
CiitaP79621 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.9□□□□□ -0.02
CiitaP79621 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.9□□□□□ -0.02
CiitaP79621 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.9□□□□□ -0.02
CiitaP79621 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Gm6244-201ENSMUST00000178732 841 ntBASIC14.9□□□□□ -0.02
CiitaP79621 Gm27892-201ENSMUST00000185017 106 ntBASIC14.9□□□□□ -0.02
CiitaP79621 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CiitaP79621 Gm17330-201ENSMUST00000221047 165 ntBASIC14.9□□□□□ -0.02
CiitaP79621 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CiitaP79621 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CiitaP79621 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms