Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pdlim4P70271 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.52□□□□□ -0.57
Pdlim4P70271 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Pdlim4P70271 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.52□□□□□ -0.57
Pdlim4P70271 Gm27989-201ENSMUST00000184721 107 ntBASIC11.52□□□□□ -0.57
Pdlim4P70271 Gm9063-201ENSMUST00000223299 582 ntBASIC11.52□□□□□ -0.57
Pdlim4P70271 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.52□□□□□ -0.57
Pdlim4P70271 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Gm14057-201ENSMUST00000120631 482 ntBASIC11.51□□□□□ -0.57
Pdlim4P70271 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Gm8584-201ENSMUST00000171982 758 ntBASIC11.51□□□□□ -0.57
Pdlim4P70271 Mir8102-201ENSMUST00000184148 139 ntBASIC11.51□□□□□ -0.57
Pdlim4P70271 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.51□□□□□ -0.57
Pdlim4P70271 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim4P70271 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim4P70271 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm15460-201ENSMUST00000118147 391 ntBASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm15393-201ENSMUST00000120499 219 ntBASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm12151-201ENSMUST00000121374 290 ntBASIC11.5□□□□□ -0.57
Pdlim4P70271 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.5□□□□□ -0.57
Pdlim4P70271 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Auts2-212ENSMUST00000178555 309 ntBASIC11.5□□□□□ -0.57
Pdlim4P70271 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm27306-201ENSMUST00000183970 107 ntBASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm27321-201ENSMUST00000185021 205 ntBASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm20949-201ENSMUST00000206478 952 ntBASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdlim4P70271 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms