Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.93□□□□□ -0.34
Six5P70178 Gm8927-201ENSMUST00000181978 981 ntBASIC12.93□□□□□ -0.34
Six5P70178 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.93□□□□□ -0.34
Six5P70178 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Gm3222-201ENSMUST00000071282 990 ntBASIC12.93□□□□□ -0.34
Six5P70178 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Six5P70178 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.93□□□□□ -0.34
Six5P70178 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.93□□□□□ -0.34
Six5P70178 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Six5P70178 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Six5P70178 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.93□□□□□ -0.34
Six5P70178 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six5P70178 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.92□□□□□ -0.34
Six5P70178 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Six5P70178 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Six5P70178 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.92□□□□□ -0.34
Six5P70178 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.92□□□□□ -0.34
Six5P70178 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Six5P70178 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.92□□□□□ -0.34
Six5P70178 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.92□□□□□ -0.34
Six5P70178 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Six5P70178 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Six5P70178 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.92□□□□□ -0.34
Six5P70178 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Six5P70178 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Six5P70178 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.92□□□□□ -0.34
Six5P70178 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six5P70178 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Six5P70178 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.91□□□□□ -0.34
Six5P70178 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Six5P70178 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Six5P70178 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Six5P70178 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.91□□□□□ -0.34
Six5P70178 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Six5P70178 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.91□□□□□ -0.34
Six5P70178 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.91□□□□□ -0.34
Six5P70178 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.91□□□□□ -0.34
Six5P70178 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Six5P70178 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six5P70178 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms