Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx1P63006 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx1P63006 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lhx1P63006 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.54□□□□□ -0.24
Lhx1P63006 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lhx1P63006 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lhx1P63006 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lhx1P63006 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Lhx1P63006 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lhx1P63006 Gm11478-201ENSMUST00000117851 599 ntBASIC13.54□□□□□ -0.24
Lhx1P63006 Gm28911-201ENSMUST00000188837 117 ntBASIC13.54□□□□□ -0.24
Lhx1P63006 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.54□□□□□ -0.24
Lhx1P63006 Gm45384-201ENSMUST00000210451 277 ntBASIC13.54□□□□□ -0.24
Lhx1P63006 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Lhx1P63006 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Lhx1P63006 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.54□□□□□ -0.24
Lhx1P63006 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Lhx1P63006 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Lhx1P63006 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx1P63006 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lhx1P63006 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lhx1P63006 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Gm15371-201ENSMUST00000117057 784 ntBASIC13.53□□□□□ -0.24
Lhx1P63006 Gm15770-201ENSMUST00000117498 584 ntBASIC13.53□□□□□ -0.24
Lhx1P63006 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.53□□□□□ -0.24
Lhx1P63006 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.53□□□□□ -0.24
Lhx1P63006 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.53□□□□□ -0.24
Lhx1P63006 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.53□□□□□ -0.24
Lhx1P63006 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.53□□□□□ -0.24
Lhx1P63006 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Gm5161-201ENSMUST00000075243 853 ntBASIC13.53□□□□□ -0.24
Lhx1P63006 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Gm24447-201ENSMUST00000083977 338 ntBASIC13.53□□□□□ -0.24
Lhx1P63006 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx1P63006 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx1P63006 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Lhx1P63006 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx1P63006 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx1P63006 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx1P63006 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx1P63006 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.52□□□□□ -0.25
Lhx1P63006 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Lhx1P63006 Gm15376-201ENSMUST00000122258 783 ntBASIC13.52□□□□□ -0.25
Lhx1P63006 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lhx1P63006 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lhx1P63006 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.52□□□□□ -0.25
Lhx1P63006 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.52□□□□□ -0.25
Lhx1P63006 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx1P63006 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lhx1P63006 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms