Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC8.02□□□□□ -1.13
Rps28P62858 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC8.02□□□□□ -1.13
Rps28P62858 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rps28P62858 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC8.02□□□□□ -1.13
Rps28P62858 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rps28P62858 Gm35960-201ENSMUST00000202712 767 ntBASIC8.02□□□□□ -1.13
Rps28P62858 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Rps28P62858 Gm37411-201ENSMUST00000194180 2282 ntBASIC8.02□□□□□ -1.13
Rps28P62858 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC8.02□□□□□ -1.13
Rps28P62858 AC241621.2-201ENSMUST00000223991 2151 ntBASIC8.02□□□□□ -1.13
Rps28P62858 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
Rps28P62858 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC8.02□□□□□ -1.13
Rps28P62858 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Rps28P62858 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
Rps28P62858 AC131029.1-201ENSMUST00000226391 2929 ntBASIC8.02□□□□□ -1.13
Rps28P62858 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rps28P62858 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Gm45630-201ENSMUST00000210243 1911 ntBASIC8.01□□□□□ -1.13
Rps28P62858 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Gm26684-202ENSMUST00000228229 8257 ntBASIC8.01□□□□□ -1.13
Rps28P62858 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC8.01□□□□□ -1.13
Rps28P62858 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Gm10602-201ENSMUST00000098239 609 ntBASIC8.01□□□□□ -1.13
Rps28P62858 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rps28P62858 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rps28P62858 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms