Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lsm3P62311 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.55□□□□□ -0.4
Lsm3P62311 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.55□□□□□ -0.4
Lsm3P62311 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Lsm3P62311 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.55□□□□□ -0.4
Lsm3P62311 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lsm3P62311 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lsm3P62311 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lsm3P62311 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lsm3P62311 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.54□□□□□ -0.4
Lsm3P62311 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.54□□□□□ -0.4
Lsm3P62311 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lsm3P62311 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lsm3P62311 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lsm3P62311 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lsm3P62311 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Lsm3P62311 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.54□□□□□ -0.4
Lsm3P62311 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.54□□□□□ -0.4
Lsm3P62311 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.54□□□□□ -0.4
Lsm3P62311 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lsm3P62311 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lsm3P62311 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.54□□□□□ -0.4
Lsm3P62311 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm3P62311 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm3P62311 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm3P62311 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm3P62311 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.53□□□□□ -0.4
Lsm3P62311 Gm5682-201ENSMUST00000173402 505 ntBASIC12.53□□□□□ -0.4
Lsm3P62311 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm3P62311 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Gm7787-201ENSMUST00000216858 688 ntBASIC12.53□□□□□ -0.4
Lsm3P62311 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm3P62311 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms