Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.19□□□□□ -0.46
Sec61a1P61620 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61a1P61620 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.18□□□□□ -0.46
Sec61a1P61620 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.18□□□□□ -0.46
Sec61a1P61620 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Mir449b-201ENSMUST00000104833 80 ntBASIC12.18□□□□□ -0.46
Sec61a1P61620 Gm8749-201ENSMUST00000117737 331 ntBASIC12.18□□□□□ -0.46
Sec61a1P61620 Gm11543-201ENSMUST00000120758 370 ntBASIC12.18□□□□□ -0.46
Sec61a1P61620 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Gm27920-201ENSMUST00000183953 96 ntBASIC12.18□□□□□ -0.46
Sec61a1P61620 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.18□□□□□ -0.46
Sec61a1P61620 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.18□□□□□ -0.46
Sec61a1P61620 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61a1P61620 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm22065-201ENSMUST00000103753 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm22066-201ENSMUST00000103761 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm24932-201ENSMUST00000103763 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm24115-201ENSMUST00000103799 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm22190-201ENSMUST00000103827 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm22191-201ENSMUST00000103831 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm24721-201ENSMUST00000103849 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm28018-201ENSMUST00000103869 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm26399-201ENSMUST00000103937 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm14042-201ENSMUST00000120139 833 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm24158-201ENSMUST00000175263 71 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm25349-201ENSMUST00000177728 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm23616-201ENSMUST00000177797 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm25871-201ENSMUST00000177816 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm24752-201ENSMUST00000178240 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm24496-201ENSMUST00000178287 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm25649-201ENSMUST00000178476 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm25548-201ENSMUST00000178681 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm23147-201ENSMUST00000178841 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm26095-201ENSMUST00000179270 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm22171-201ENSMUST00000179283 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm23936-201ENSMUST00000179354 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm22619-201ENSMUST00000179516 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm25255-201ENSMUST00000179579 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm24755-201ENSMUST00000179691 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm26506-201ENSMUST00000179692 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm25086-201ENSMUST00000179931 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm23243-201ENSMUST00000180047 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm24659-201ENSMUST00000180212 110 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms