Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cks1bP61025 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC9.87□□□□□ -0.83
Cks1bP61025 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cks1bP61025 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cks1bP61025 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cks1bP61025 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC9.87□□□□□ -0.83
Cks1bP61025 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cks1bP61025 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1bP61025 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC9.86□□□□□ -0.83
Cks1bP61025 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Gm13836-201ENSMUST00000121159 501 ntBASIC9.86□□□□□ -0.83
Cks1bP61025 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Gm4535-201ENSMUST00000182274 558 ntBASIC9.86□□□□□ -0.83
Cks1bP61025 Mir7071-201ENSMUST00000184847 69 ntBASIC9.86□□□□□ -0.83
Cks1bP61025 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Gm37584-201ENSMUST00000193595 1290 ntBASIC9.86□□□□□ -0.83
Cks1bP61025 Gm33142-201ENSMUST00000193913 867 ntBASIC9.86□□□□□ -0.83
Cks1bP61025 Gm13830-205ENSMUST00000201195 1155 ntBASIC9.86□□□□□ -0.83
Cks1bP61025 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC9.86□□□□□ -0.83
Cks1bP61025 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cks1bP61025 Gm10355-201ENSMUST00000097146 517 ntBASIC9.86□□□□□ -0.83
Cks1bP61025 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cks1bP61025 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC9.86□□□□□ -0.83
Cks1bP61025 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1bP61025 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.86□□□□□ -0.83
Cks1bP61025 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.85□□□□□ -0.83
Cks1bP61025 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.85□□□□□ -0.83
Cks1bP61025 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cks1bP61025 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Cks1bP61025 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC9.85□□□□□ -0.83
Cks1bP61025 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cks1bP61025 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1bP61025 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.85□□□□□ -0.83
Cks1bP61025 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms