Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm17795-201ENSMUST00000214505 757 ntBASIC13.05□□□□□ -0.32
Nup43P59235 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.05□□□□□ -0.32
Nup43P59235 Gm9797-201ENSMUST00000052902 613 ntBASIC13.05□□□□□ -0.32
Nup43P59235 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.05□□□□□ -0.32
Nup43P59235 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup43P59235 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nup43P59235 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup43P59235 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nup43P59235 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup43P59235 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nup43P59235 Gm18905-201ENSMUST00000205454 928 ntBASIC13.04□□□□□ -0.32
Nup43P59235 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.04□□□□□ -0.32
Nup43P59235 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.04□□□□□ -0.32
Nup43P59235 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.04□□□□□ -0.32
Nup43P59235 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.04□□□□□ -0.32
Nup43P59235 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Nup43P59235 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup43P59235 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup43P59235 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.03□□□□□ -0.32
Nup43P59235 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Nup43P59235 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup43P59235 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.03□□□□□ -0.32
Nup43P59235 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.03□□□□□ -0.32
Nup43P59235 Gm27437-201ENSMUST00000183429 107 ntBASIC13.03□□□□□ -0.32
Nup43P59235 Gm44855-201ENSMUST00000205725 362 ntBASIC13.03□□□□□ -0.32
Nup43P59235 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nup43P59235 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nup43P59235 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Nup43P59235 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup43P59235 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.02□□□□□ -0.32
Nup43P59235 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup43P59235 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup43P59235 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup43P59235 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Nup43P59235 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup43P59235 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Nup43P59235 Gm15240-201ENSMUST00000118156 720 ntBASIC13.02□□□□□ -0.33
Nup43P59235 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.02□□□□□ -0.33
Nup43P59235 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.02□□□□□ -0.33
Nup43P59235 Gm28760-201ENSMUST00000185995 736 ntBASIC13.02□□□□□ -0.33
Nup43P59235 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.02□□□□□ -0.33
Nup43P59235 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.02□□□□□ -0.33
Nup43P59235 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.02□□□□□ -0.33
Nup43P59235 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.02□□□□□ -0.33
Nup43P59235 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nup43P59235 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nup43P59235 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nup43P59235 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup43P59235 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms