Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sssca1P56873 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.15□□□□□ -0.62
Sssca1P56873 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.15□□□□□ -0.62
Sssca1P56873 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.15□□□□□ -0.62
Sssca1P56873 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.15□□□□□ -0.62
Sssca1P56873 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sssca1P56873 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sssca1P56873 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.15□□□□□ -0.62
Sssca1P56873 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.15□□□□□ -0.62
Sssca1P56873 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.15□□□□□ -0.62
Sssca1P56873 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.15□□□□□ -0.62
Sssca1P56873 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.15□□□□□ -0.62
Sssca1P56873 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.15□□□□□ -0.62
Sssca1P56873 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.15□□□□□ -0.62
Sssca1P56873 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
Sssca1P56873 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sssca1P56873 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sssca1P56873 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sssca1P56873 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sssca1P56873 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sssca1P56873 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.14□□□□□ -0.63
Sssca1P56873 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.14□□□□□ -0.63
Sssca1P56873 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sssca1P56873 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.14□□□□□ -0.63
Sssca1P56873 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.14□□□□□ -0.63
Sssca1P56873 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sssca1P56873 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sssca1P56873 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Psmb5-202ENSMUST00000227257 622 ntBASIC11.14□□□□□ -0.63
Sssca1P56873 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Sssca1P56873 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sssca1P56873 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sssca1P56873 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sssca1P56873 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sssca1P56873 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Sssca1P56873 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.13□□□□□ -0.63
Sssca1P56873 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sssca1P56873 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sssca1P56873 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sssca1P56873 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms