Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdh11P55288 Gm27622-201ENSMUST00000183779 60 ntBASIC12.61□□□□□ -0.39
Cdh11P55288 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdh11P55288 Gm20949-201ENSMUST00000206478 952 ntBASIC12.61□□□□□ -0.39
Cdh11P55288 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh11P55288 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Gm9182-201ENSMUST00000217829 639 ntBASIC12.61□□□□□ -0.39
Cdh11P55288 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdh11P55288 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Cdh11P55288 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.61□□□□□ -0.39
Cdh11P55288 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh11P55288 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.6□□□□□ -0.39
Cdh11P55288 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Cdh11P55288 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.6□□□□□ -0.39
Cdh11P55288 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdh11P55288 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Gm6415-201ENSMUST00000118488 348 ntBASIC12.6□□□□□ -0.39
Cdh11P55288 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.6□□□□□ -0.39
Cdh11P55288 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Gm18049-201ENSMUST00000208909 581 ntBASIC12.6□□□□□ -0.39
Cdh11P55288 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Cdh11P55288 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdh11P55288 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.6□□□□□ -0.39
Cdh11P55288 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh11P55288 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cdh11P55288 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdh11P55288 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdh11P55288 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms