Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ephb3P54754 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ephb3P54754 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ephb3P54754 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ephb3P54754 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ephb3P54754 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ephb3P54754 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ephb3P54754 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ephb3P54754 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ephb3P54754 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.4□□□□□ -0.1
Ephb3P54754 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ephb3P54754 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.4□□□□□ -0.1
Ephb3P54754 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Mir686-201ENSMUST00000102174 109 ntBASIC14.4□□□□□ -0.1
Ephb3P54754 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.4□□□□□ -0.1
Ephb3P54754 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.4□□□□□ -0.1
Ephb3P54754 Gm29608-201ENSMUST00000190444 463 ntBASIC14.4□□□□□ -0.1
Ephb3P54754 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.4□□□□□ -0.1
Ephb3P54754 Gm45865-201ENSMUST00000211815 945 ntBASIC14.4□□□□□ -0.1
Ephb3P54754 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ephb3P54754 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.4□□□□□ -0.1
Ephb3P54754 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ephb3P54754 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ephb3P54754 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Ephb3P54754 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ephb3P54754 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ephb3P54754 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ephb3P54754 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.39□□□□□ -0.11
Ephb3P54754 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ephb3P54754 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Mir877-201ENSMUST00000104738 85 ntBASIC14.39□□□□□ -0.11
Ephb3P54754 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.39□□□□□ -0.11
Ephb3P54754 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.39□□□□□ -0.11
Ephb3P54754 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.39□□□□□ -0.11
Ephb3P54754 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.39□□□□□ -0.11
Ephb3P54754 Gm9368-201ENSMUST00000219348 831 ntBASIC14.39□□□□□ -0.11
Ephb3P54754 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Gm10268-201ENSMUST00000085340 555 ntBASIC14.39□□□□□ -0.11
Ephb3P54754 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.39□□□□□ -0.11
Ephb3P54754 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ephb3P54754 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ephb3P54754 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.39□□□□□ -0.11
Ephb3P54754 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ephb3P54754 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ephb3P54754 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Ephb3P54754 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ephb3P54754 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Gm5687-201ENSMUST00000118252 640 ntBASIC14.38□□□□□ -0.11
Ephb3P54754 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ephb3P54754 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.38□□□□□ -0.11
Ephb3P54754 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.38□□□□□ -0.11
Ephb3P54754 Gm37259-201ENSMUST00000193903 849 ntBASIC14.38□□□□□ -0.11
Ephb3P54754 Gm42627-201ENSMUST00000197347 224 ntBASIC14.38□□□□□ -0.11
Ephb3P54754 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.38□□□□□ -0.11
Ephb3P54754 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.38□□□□□ -0.11
Ephb3P54754 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms