Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.04□□□□□ -0.16
Sox1P53783 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox1P53783 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox1P53783 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox1P53783 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Sox1P53783 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sox1P53783 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox1P53783 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.03□□□□□ -0.16
Sox1P53783 Gm28450-201ENSMUST00000187349 638 ntBASIC14.03□□□□□ -0.16
Sox1P53783 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox1P53783 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.03□□□□□ -0.16
Sox1P53783 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Sox1P53783 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.03□□□□□ -0.16
Sox1P53783 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox1P53783 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox1P53783 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox1P53783 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.02□□□□□ -0.16
Sox1P53783 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.02□□□□□ -0.16
Sox1P53783 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.02□□□□□ -0.16
Sox1P53783 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox1P53783 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.02□□□□□ -0.16
Sox1P53783 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox1P53783 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.02□□□□□ -0.17
Sox1P53783 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.02□□□□□ -0.17
Sox1P53783 Gm3890-201ENSMUST00000182416 207 ntBASIC14.02□□□□□ -0.17
Sox1P53783 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.02□□□□□ -0.17
Sox1P53783 Gm44126-201ENSMUST00000204831 514 ntBASIC14.02□□□□□ -0.17
Sox1P53783 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sox1P53783 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sox1P53783 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox1P53783 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.01□□□□□ -0.17
Sox1P53783 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Gm14130-201ENSMUST00000118417 987 ntBASIC14.01□□□□□ -0.17
Sox1P53783 Gm14726-201ENSMUST00000120623 896 ntBASIC14.01□□□□□ -0.17
Sox1P53783 Gm16479-201ENSMUST00000121706 932 ntBASIC14.01□□□□□ -0.17
Sox1P53783 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox1P53783 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms