Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.12□□□□□ -0.47
GdnfP48540 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
GdnfP48540 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.12□□□□□ -0.47
GdnfP48540 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
GdnfP48540 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GdnfP48540 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.11□□□□□ -0.47
GdnfP48540 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.11□□□□□ -0.47
GdnfP48540 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.11□□□□□ -0.47
GdnfP48540 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.11□□□□□ -0.47
GdnfP48540 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.11□□□□□ -0.47
GdnfP48540 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
GdnfP48540 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.11□□□□□ -0.47
GdnfP48540 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.11□□□□□ -0.47
GdnfP48540 Gm13365-201ENSMUST00000121188 973 ntBASIC12.11□□□□□ -0.47
GdnfP48540 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Gm43930-201ENSMUST00000203868 845 ntBASIC12.11□□□□□ -0.47
GdnfP48540 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.11□□□□□ -0.47
GdnfP48540 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
GdnfP48540 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
GdnfP48540 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.11□□□□□ -0.47
GdnfP48540 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GdnfP48540 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
GdnfP48540 Gm6754-201ENSMUST00000117124 913 ntBASIC12.1□□□□□ -0.47
GdnfP48540 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
GdnfP48540 Gm24513-201ENSMUST00000174964 138 ntBASIC12.1□□□□□ -0.47
GdnfP48540 Gm27397-201ENSMUST00000184997 107 ntBASIC12.1□□□□□ -0.47
GdnfP48540 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.1□□□□□ -0.47
GdnfP48540 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.1□□□□□ -0.47
GdnfP48540 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.1□□□□□ -0.47
GdnfP48540 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
GdnfP48540 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.1□□□□□ -0.47
GdnfP48540 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.1□□□□□ -0.47
GdnfP48540 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GdnfP48540 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
GdnfP48540 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms