Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdx2P43241 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdx2P43241 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdx2P43241 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdx2P43241 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdx2P43241 Gm13350-201ENSMUST00000120519 479 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.05□□□□□ -0.32
Cdx2P43241 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.05□□□□□ -0.32
Cdx2P43241 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Gm7584-201ENSMUST00000175829 940 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Gm38241-201ENSMUST00000192641 898 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Gm38144-201ENSMUST00000192790 465 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Gm10268-201ENSMUST00000085340 555 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdx2P43241 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Cdx2P43241 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Cdx2P43241 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdx2P43241 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.05□□□□□ -0.32
Cdx2P43241 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdx2P43241 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdx2P43241 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.04□□□□□ -0.32
Cdx2P43241 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdx2P43241 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdx2P43241 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdx2P43241 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdx2P43241 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.04□□□□□ -0.32
Cdx2P43241 Gm43118-201ENSMUST00000199149 775 ntBASIC13.04□□□□□ -0.32
Cdx2P43241 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdx2P43241 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.04□□□□□ -0.32
Cdx2P43241 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.04□□□□□ -0.32
Cdx2P43241 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.04□□□□□ -0.32
Cdx2P43241 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdx2P43241 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdx2P43241 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdx2P43241 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms