Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.5□□□□□ -0.57
Abca1P41233 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Abca1P41233 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Abca1P41233 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Abca1P41233 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Abca1P41233 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.49□□□□□ -0.57
Abca1P41233 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Abca1P41233 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
Abca1P41233 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.49□□□□□ -0.57
Abca1P41233 Gm9257-201ENSMUST00000221254 232 ntBASIC11.49□□□□□ -0.57
Abca1P41233 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.49□□□□□ -0.57
Abca1P41233 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.49□□□□□ -0.57
Abca1P41233 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Abca1P41233 Gm15198-201ENSMUST00000117283 177 ntBASIC11.49□□□□□ -0.57
Abca1P41233 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.49□□□□□ -0.57
Abca1P41233 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Abca1P41233 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.49□□□□□ -0.57
Abca1P41233 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Abca1P41233 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Abca1P41233 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.48□□□□□ -0.57
Abca1P41233 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.48□□□□□ -0.57
Abca1P41233 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.48□□□□□ -0.57
Abca1P41233 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Abca1P41233 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.48□□□□□ -0.57
Abca1P41233 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Abca1P41233 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Abca1P41233 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.48□□□□□ -0.57
Abca1P41233 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Abca1P41233 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Abca1P41233 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Abca1P41233 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Abca1P41233 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Abca1P41233 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.47□□□□□ -0.57
Abca1P41233 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Abca1P41233 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms