Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Sox6P40645 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox6P40645 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.98□□□□□ -0.33
Sox6P40645 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sox6P40645 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox6P40645 Gm24158-201ENSMUST00000175263 71 ntBASIC12.98□□□□□ -0.33
Sox6P40645 Gm43474-201ENSMUST00000196415 774 ntBASIC12.98□□□□□ -0.33
Sox6P40645 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox6P40645 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Sox6P40645 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.97□□□□□ -0.33
Sox6P40645 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox6P40645 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox6P40645 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.97□□□□□ -0.33
Sox6P40645 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox6P40645 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox6P40645 Gm5312-201ENSMUST00000203728 547 ntBASIC12.97□□□□□ -0.33
Sox6P40645 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Sox6P40645 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox6P40645 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Sox6P40645 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.97□□□□□ -0.33
Sox6P40645 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox6P40645 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sox6P40645 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox6P40645 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sox6P40645 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox6P40645 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Sox6P40645 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox6P40645 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox6P40645 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox6P40645 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox6P40645 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox6P40645 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox6P40645 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox6P40645 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox6P40645 Gm14701-201ENSMUST00000117156 348 ntBASIC12.96□□□□□ -0.33
Sox6P40645 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sox6P40645 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox6P40645 Gm9824-201ENSMUST00000178707 561 ntBASIC12.96□□□□□ -0.33
Sox6P40645 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox6P40645 Gm37230-201ENSMUST00000194491 818 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms