Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Sftpa1P35242 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sftpa1P35242 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.71□□□□□ -0.38
Sftpa1P35242 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.71□□□□□ -0.38
Sftpa1P35242 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sftpa1P35242 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sftpa1P35242 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sftpa1P35242 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sftpa1P35242 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sftpa1P35242 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.71□□□□□ -0.38
Sftpa1P35242 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sftpa1P35242 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.7□□□□□ -0.38
Sftpa1P35242 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.7□□□□□ -0.38
Sftpa1P35242 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Gm44364-201ENSMUST00000198368 141 ntBASIC12.7□□□□□ -0.38
Sftpa1P35242 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Cts7-204ENSMUST00000225321 1257 ntBASIC12.7□□□□□ -0.38
Sftpa1P35242 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.7□□□□□ -0.38
Sftpa1P35242 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sftpa1P35242 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sftpa1P35242 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Gm13369-201ENSMUST00000119442 987 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.69□□□□□ -0.38
Sftpa1P35242 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.69□□□□□ -0.38
Sftpa1P35242 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Gm26461-201ENSMUST00000175064 290 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Mir3547-201ENSMUST00000175461 88 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Gm29199-201ENSMUST00000187766 775 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sftpa1P35242 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.69□□□□□ -0.38
Sftpa1P35242 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.69□□□□□ -0.38
Sftpa1P35242 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.69□□□□□ -0.38
Sftpa1P35242 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sftpa1P35242 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sftpa1P35242 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sftpa1P35242 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sftpa1P35242 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sftpa1P35242 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Sftpa1P35242 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sftpa1P35242 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sftpa1P35242 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.68□□□□□ -0.38
Sftpa1P35242 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sftpa1P35242 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Sftpa1P35242 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms