Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rom1P32958 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rom1P32958 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rom1P32958 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.92□□□□□ -0.66
Rom1P32958 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rom1P32958 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rom1P32958 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rom1P32958 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.92□□□□□ -0.66
Rom1P32958 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rom1P32958 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rom1P32958 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.91□□□□□ -0.66
Rom1P32958 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Rom1P32958 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rom1P32958 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rom1P32958 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rom1P32958 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.9□□□□□ -0.66
Rom1P32958 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rom1P32958 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Rom1P32958 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rom1P32958 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Rom1P32958 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.9□□□□□ -0.66
Rom1P32958 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.9□□□□□ -0.66
Rom1P32958 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Gm29741-201ENSMUST00000192667 421 ntBASIC10.9□□□□□ -0.66
Rom1P32958 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.9□□□□□ -0.66
Rom1P32958 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.9□□□□□ -0.66
Rom1P32958 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.9□□□□□ -0.66
Rom1P32958 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rom1P32958 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.9□□□□□ -0.66
Rom1P32958 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rom1P32958 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rom1P32958 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rom1P32958 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rom1P32958 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rom1P32958 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms