Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Slc6a1P31648 Gm24513-201ENSMUST00000174964 138 ntBASIC11.88□□□□□ -0.51
Slc6a1P31648 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc6a1P31648 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.88□□□□□ -0.51
Slc6a1P31648 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Slc6a1P31648 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Slc6a1P31648 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc6a1P31648 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.87□□□□□ -0.51
Slc6a1P31648 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.87□□□□□ -0.51
Slc6a1P31648 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gm27397-201ENSMUST00000184997 107 ntBASIC11.87□□□□□ -0.51
Slc6a1P31648 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.87□□□□□ -0.51
Slc6a1P31648 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.87□□□□□ -0.51
Slc6a1P31648 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc6a1P31648 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.87□□□□□ -0.51
Slc6a1P31648 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.87□□□□□ -0.51
Slc6a1P31648 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Gm11594-201ENSMUST00000122313 162 ntBASIC11.86□□□□□ -0.51
Slc6a1P31648 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Gm45167-201ENSMUST00000208007 322 ntBASIC11.86□□□□□ -0.51
Slc6a1P31648 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.86□□□□□ -0.51
Slc6a1P31648 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.86□□□□□ -0.51
Slc6a1P31648 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms