Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cd28P31041 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cd28P31041 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.16□□□□□ -0.46
Cd28P31041 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.16□□□□□ -0.46
Cd28P31041 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.16□□□□□ -0.46
Cd28P31041 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cd28P31041 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.16□□□□□ -0.46
Cd28P31041 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.15□□□□□ -0.46
Cd28P31041 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Cd28P31041 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cd28P31041 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.15□□□□□ -0.46
Cd28P31041 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.15□□□□□ -0.46
Cd28P31041 Gm9385-201ENSMUST00000117563 472 ntBASIC12.15□□□□□ -0.46
Cd28P31041 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.15□□□□□ -0.46
Cd28P31041 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cd28P31041 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cd28P31041 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.15□□□□□ -0.46
Cd28P31041 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.15□□□□□ -0.46
Cd28P31041 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Cd28P31041 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cd28P31041 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cd28P31041 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cd28P31041 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cd28P31041 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Cd28P31041 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cd28P31041 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.14□□□□□ -0.47
Cd28P31041 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cd28P31041 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd28P31041 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.14□□□□□ -0.47
Cd28P31041 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.14□□□□□ -0.47
Cd28P31041 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.14□□□□□ -0.47
Cd28P31041 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cd28P31041 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cd28P31041 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms