Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.73□□□□□ -0.37
Nedd8P29595 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nedd8P29595 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nedd8P29595 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nedd8P29595 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nedd8P29595 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nedd8P29595 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.72□□□□□ -0.37
Nedd8P29595 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.72□□□□□ -0.37
Nedd8P29595 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Gm15565-201ENSMUST00000118890 427 ntBASIC12.72□□□□□ -0.37
Nedd8P29595 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.72□□□□□ -0.37
Nedd8P29595 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.72□□□□□ -0.37
Nedd8P29595 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nedd8P29595 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nedd8P29595 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nedd8P29595 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Nedd8P29595 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.71□□□□□ -0.37
Nedd8P29595 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nedd8P29595 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.71□□□□□ -0.37
Nedd8P29595 Gm7787-201ENSMUST00000216858 688 ntBASIC12.71□□□□□ -0.37
Nedd8P29595 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nedd8P29595 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Nedd8P29595 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nedd8P29595 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nedd8P29595 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nedd8P29595 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.71□□□□□ -0.38
Nedd8P29595 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.71□□□□□ -0.38
Nedd8P29595 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.71□□□□□ -0.38
Nedd8P29595 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.71□□□□□ -0.38
Nedd8P29595 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.71□□□□□ -0.38
Nedd8P29595 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nedd8P29595 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nedd8P29595 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nedd8P29595 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.7□□□□□ -0.38
Nedd8P29595 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nedd8P29595 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.7□□□□□ -0.38
Nedd8P29595 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms