Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm15565-201ENSMUST00000118890 427 ntBASIC14.4□□□□□ -0.1
H2afxP27661 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.4□□□□□ -0.1
H2afxP27661 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.4□□□□□ -0.1
H2afxP27661 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.4□□□□□ -0.1
H2afxP27661 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
H2afxP27661 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
H2afxP27661 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.4□□□□□ -0.1
H2afxP27661 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.4□□□□□ -0.1
H2afxP27661 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afxP27661 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
H2afxP27661 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
H2afxP27661 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H2afxP27661 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H2afxP27661 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
H2afxP27661 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.39□□□□□ -0.11
H2afxP27661 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.39□□□□□ -0.11
H2afxP27661 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
H2afxP27661 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afxP27661 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
H2afxP27661 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.39□□□□□ -0.11
H2afxP27661 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.39□□□□□ -0.11
H2afxP27661 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
H2afxP27661 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.38□□□□□ -0.11
H2afxP27661 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
H2afxP27661 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.38□□□□□ -0.11
H2afxP27661 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
H2afxP27661 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.38□□□□□ -0.11
H2afxP27661 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Gm6089-201ENSMUST00000197666 938 ntBASIC14.38□□□□□ -0.11
H2afxP27661 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.38□□□□□ -0.11
H2afxP27661 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.38□□□□□ -0.11
H2afxP27661 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.38□□□□□ -0.11
H2afxP27661 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.38□□□□□ -0.11
H2afxP27661 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.38□□□□□ -0.11
H2afxP27661 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.38□□□□□ -0.11
H2afxP27661 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
H2afxP27661 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afxP27661 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afxP27661 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afxP27661 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afxP27661 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afxP27661 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.37□□□□□ -0.11
H2afxP27661 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afxP27661 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afxP27661 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
H2afxP27661 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afxP27661 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms