Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Col8a2P25318 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Col8a2P25318 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.52□□□□□ -0.57
Col8a2P25318 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.52□□□□□ -0.57
Col8a2P25318 Gm5354-201ENSMUST00000182417 973 ntBASIC11.52□□□□□ -0.57
Col8a2P25318 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.52□□□□□ -0.57
Col8a2P25318 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.52□□□□□ -0.57
Col8a2P25318 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.52□□□□□ -0.57
Col8a2P25318 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.52□□□□□ -0.57
Col8a2P25318 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.52□□□□□ -0.57
Col8a2P25318 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
Col8a2P25318 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Col8a2P25318 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Col8a2P25318 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col8a2P25318 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col8a2P25318 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.51□□□□□ -0.57
Col8a2P25318 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col8a2P25318 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col8a2P25318 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.51□□□□□ -0.57
Col8a2P25318 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.51□□□□□ -0.57
Col8a2P25318 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col8a2P25318 Gm18905-201ENSMUST00000205454 928 ntBASIC11.51□□□□□ -0.57
Col8a2P25318 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.51□□□□□ -0.57
Col8a2P25318 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.51□□□□□ -0.57
Col8a2P25318 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.51□□□□□ -0.57
Col8a2P25318 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col8a2P25318 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Col8a2P25318 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col8a2P25318 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.5□□□□□ -0.57
Col8a2P25318 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Col8a2P25318 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col8a2P25318 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col8a2P25318 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col8a2P25318 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.5□□□□□ -0.57
Col8a2P25318 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col8a2P25318 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Gm8515-201ENSMUST00000194852 576 ntBASIC11.5□□□□□ -0.57
Col8a2P25318 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.5□□□□□ -0.57
Col8a2P25318 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.5□□□□□ -0.57
Col8a2P25318 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms