Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.29□□□□□ -0.44
P20040 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P20040 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P20040 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P20040 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P20040 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
P20040 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.28□□□□□ -0.44
P20040 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
P20040 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Gm6415-201ENSMUST00000118488 348 ntBASIC12.28□□□□□ -0.44
P20040 Gm13015-201ENSMUST00000118674 204 ntBASIC12.28□□□□□ -0.44
P20040 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.28□□□□□ -0.44
P20040 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.28□□□□□ -0.44
P20040 AA543401-201ENSMUST00000164248 1269 ntBASIC12.28□□□□□ -0.44
P20040 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.28□□□□□ -0.44
P20040 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.28□□□□□ -0.44
P20040 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.28□□□□□ -0.44
P20040 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.28□□□□□ -0.44
P20040 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.28□□□□□ -0.44
P20040 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.28□□□□□ -0.44
P20040 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P20040 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P20040 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.27□□□□□ -0.44
P20040 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P20040 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P20040 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P20040 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.27□□□□□ -0.44
P20040 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.27□□□□□ -0.44
P20040 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P20040 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P20040 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P20040 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Gm8410-201ENSMUST00000117225 605 ntBASIC12.27□□□□□ -0.45
P20040 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.27□□□□□ -0.45
P20040 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.27□□□□□ -0.45
P20040 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
P20040 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
P20040 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
P20040 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P20040 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.27□□□□□ -0.45
P20040 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms