Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.4□□□□□ -0.42
Cd48P18181 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Gm11745-201ENSMUST00000121669 448 ntBASIC12.4□□□□□ -0.42
Cd48P18181 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.4□□□□□ -0.42
Cd48P18181 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cd48P18181 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cd48P18181 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.4□□□□□ -0.42
Cd48P18181 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Cd48P18181 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd48P18181 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd48P18181 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd48P18181 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd48P18181 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Cd48P18181 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd48P18181 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cd48P18181 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cd48P18181 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.39□□□□□ -0.43
Cd48P18181 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 BC001981-202ENSMUST00000191393 1545 ntBASIC12.39□□□□□ -0.43
Cd48P18181 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.39□□□□□ -0.43
Cd48P18181 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.39□□□□□ -0.43
Cd48P18181 Gm18889-201ENSMUST00000174284 929 ntBASIC12.39□□□□□ -0.43
Cd48P18181 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cd48P18181 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cd48P18181 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.39□□□□□ -0.43
Cd48P18181 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Cd48P18181 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.39□□□□□ -0.43
Cd48P18181 Gm18041-201ENSMUST00000218210 618 ntBASIC12.39□□□□□ -0.43
Cd48P18181 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Cd48P18181 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.39□□□□□ -0.43
Cd48P18181 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.39□□□□□ -0.43
Cd48P18181 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cd48P18181 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cd48P18181 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.39□□□□□ -0.43
Cd48P18181 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd48P18181 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.38□□□□□ -0.43
Cd48P18181 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cd48P18181 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cd48P18181 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cd48P18181 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Cd48P18181 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.38□□□□□ -0.43
Cd48P18181 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Gm13823-201ENSMUST00000119930 345 ntBASIC12.38□□□□□ -0.43
Cd48P18181 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.38□□□□□ -0.43
Cd48P18181 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.38□□□□□ -0.43
Cd48P18181 Gm43514-201ENSMUST00000198852 424 ntBASIC12.38□□□□□ -0.43
Cd48P18181 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.38□□□□□ -0.43
Cd48P18181 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.38□□□□□ -0.43
Cd48P18181 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd48P18181 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms