Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.24■□□□□ 0.03
Hoxc6P10629 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc6P10629 Gm15236-201ENSMUST00000117309 379 ntBASIC15.24■□□□□ 0.03
Hoxc6P10629 Gm13350-201ENSMUST00000120519 479 ntBASIC15.24■□□□□ 0.03
Hoxc6P10629 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Hoxc6P10629 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.24■□□□□ 0.03
Hoxc6P10629 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Hoxc6P10629 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.24■□□□□ 0.03
Hoxc6P10629 Gm7584-201ENSMUST00000175829 940 ntBASIC15.24■□□□□ 0.03
Hoxc6P10629 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.24■□□□□ 0.03
Hoxc6P10629 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.24■□□□□ 0.03
Hoxc6P10629 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc6P10629 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc6P10629 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.24■□□□□ 0.03
Hoxc6P10629 Gm26315-201ENSMUST00000083890 321 ntBASIC15.24■□□□□ 0.03
Hoxc6P10629 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hoxc6P10629 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc6P10629 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.23■□□□□ 0.03
Hoxc6P10629 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.23■□□□□ 0.03
Hoxc6P10629 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.23■□□□□ 0.03
Hoxc6P10629 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.23■□□□□ 0.03
Hoxc6P10629 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.23■□□□□ 0.03
Hoxc6P10629 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.23■□□□□ 0.03
Hoxc6P10629 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Gm27516-201ENSMUST00000184237 98 ntBASIC15.23■□□□□ 0.03
Hoxc6P10629 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.23■□□□□ 0.03
Hoxc6P10629 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hoxc6P10629 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc6P10629 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hoxc6P10629 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Hoxc6P10629 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.22■□□□□ 0.03
Hoxc6P10629 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.22■□□□□ 0.03
Hoxc6P10629 Gm27243-201ENSMUST00000183964 521 ntBASIC15.22■□□□□ 0.03
Hoxc6P10629 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.22■□□□□ 0.03
Hoxc6P10629 Gm29608-201ENSMUST00000190444 463 ntBASIC15.22■□□□□ 0.03
Hoxc6P10629 Gm4857-201ENSMUST00000192718 785 ntBASIC15.22■□□□□ 0.03
Hoxc6P10629 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.22■□□□□ 0.03
Hoxc6P10629 Gm10268-201ENSMUST00000085340 555 ntBASIC15.22■□□□□ 0.03
Hoxc6P10629 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.22■□□□□ 0.03
Hoxc6P10629 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc6P10629 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc6P10629 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Hoxc6P10629 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.21■□□□□ 0.03
Hoxc6P10629 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Gm11793-201ENSMUST00000120433 981 ntBASIC15.21■□□□□ 0.03
Hoxc6P10629 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.21■□□□□ 0.03
Hoxc6P10629 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Gm37922-201ENSMUST00000195596 455 ntBASIC15.21■□□□□ 0.03
Hoxc6P10629 Gm43133-201ENSMUST00000197472 463 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms