Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.19□□□□□ -0.62
P04940 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04940 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04940 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.19□□□□□ -0.62
P04940 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04940 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.19□□□□□ -0.62
P04940 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.19□□□□□ -0.62
P04940 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04940 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
P04940 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04940 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P04940 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.18□□□□□ -0.62
P04940 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P04940 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
P04940 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P04940 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.18□□□□□ -0.62
P04940 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P04940 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.18□□□□□ -0.62
P04940 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
P04940 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Gm25925-201ENSMUST00000158314 306 ntBASIC11.18□□□□□ -0.62
P04940 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
P04940 Gm27989-201ENSMUST00000184721 107 ntBASIC11.18□□□□□ -0.62
P04940 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.18□□□□□ -0.62
P04940 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.18□□□□□ -0.62
P04940 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.18□□□□□ -0.62
P04940 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
P04940 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
P04940 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.18□□□□□ -0.62
P04940 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04940 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.17□□□□□ -0.62
P04940 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
P04940 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.17□□□□□ -0.62
P04940 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.17□□□□□ -0.62
P04940 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.17□□□□□ -0.62
P04940 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
P04940 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.17□□□□□ -0.62
P04940 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.17□□□□□ -0.62
P04940 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.17□□□□□ -0.62
P04940 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.17□□□□□ -0.62
P04940 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.17□□□□□ -0.62
P04940 Gm27838-201ENSMUST00000184829 128 ntBASIC11.17□□□□□ -0.62
P04940 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.17□□□□□ -0.62
P04940 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.17□□□□□ -0.62
P04940 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
P04940 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
P04940 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.17□□□□□ -0.62
P04940 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.17□□□□□ -0.62
P04940 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04940 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
P04940 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
P04940 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms