Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.59□□□□□ -0.55
Hoxa3P02831 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.59□□□□□ -0.55
Hoxa3P02831 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Hoxa3P02831 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.59□□□□□ -0.55
Hoxa3P02831 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxa3P02831 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.59□□□□□ -0.55
Hoxa3P02831 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hoxa3P02831 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.59□□□□□ -0.55
Hoxa3P02831 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.59□□□□□ -0.55
Hoxa3P02831 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hoxa3P02831 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Hoxa3P02831 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hoxa3P02831 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hoxa3P02831 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.58□□□□□ -0.56
Hoxa3P02831 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Gm12138-201ENSMUST00000122180 951 ntBASIC11.58□□□□□ -0.56
Hoxa3P02831 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.58□□□□□ -0.56
Hoxa3P02831 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.58□□□□□ -0.56
Hoxa3P02831 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Gm21470-201ENSMUST00000187680 696 ntBASIC11.58□□□□□ -0.56
Hoxa3P02831 Gm28631-201ENSMUST00000190740 334 ntBASIC11.58□□□□□ -0.56
Hoxa3P02831 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Gm45668-201ENSMUST00000211271 493 ntBASIC11.58□□□□□ -0.56
Hoxa3P02831 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.58□□□□□ -0.56
Hoxa3P02831 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.58□□□□□ -0.56
Hoxa3P02831 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
Hoxa3P02831 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa3P02831 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa3P02831 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxa3P02831 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms