Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Matn4O89029 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.03□□□□□ -0.32
Matn4O89029 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.03□□□□□ -0.32
Matn4O89029 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Matn4O89029 Gm5566-201ENSMUST00000116118 459 ntBASIC13.03□□□□□ -0.32
Matn4O89029 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Matn4O89029 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.03□□□□□ -0.32
Matn4O89029 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.03□□□□□ -0.32
Matn4O89029 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.03□□□□□ -0.32
Matn4O89029 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Matn4O89029 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Matn4O89029 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.03□□□□□ -0.32
Matn4O89029 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.03□□□□□ -0.32
Matn4O89029 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Matn4O89029 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Matn4O89029 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Matn4O89029 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.03□□□□□ -0.32
Matn4O89029 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Matn4O89029 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn4O89029 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn4O89029 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Matn4O89029 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Matn4O89029 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn4O89029 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Matn4O89029 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Mir698-201ENSMUST00000102164 109 ntBASIC13.02□□□□□ -0.33
Matn4O89029 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Matn4O89029 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Gm9719-201ENSMUST00000162765 543 ntBASIC13.02□□□□□ -0.33
Matn4O89029 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.02□□□□□ -0.33
Matn4O89029 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Matn4O89029 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.02□□□□□ -0.33
Matn4O89029 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Matn4O89029 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Matn4O89029 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Matn4O89029 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Matn4O89029 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Matn4O89029 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Matn4O89029 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Matn4O89029 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Matn4O89029 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Matn4O89029 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Matn4O89029 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Matn4O89029 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.01□□□□□ -0.33
Matn4O89029 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.01□□□□□ -0.33
Matn4O89029 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.01□□□□□ -0.33
Matn4O89029 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Matn4O89029 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.01□□□□□ -0.33
Matn4O89029 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.01□□□□□ -0.33
Matn4O89029 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms