Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col5a1O88207 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col5a1O88207 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col5a1O88207 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.26□□□□□ -0.45
Col5a1O88207 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Gm16202-201ENSMUST00000117532 544 ntBASIC12.26□□□□□ -0.45
Col5a1O88207 Gm11439-201ENSMUST00000118598 409 ntBASIC12.26□□□□□ -0.45
Col5a1O88207 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col5a1O88207 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.26□□□□□ -0.45
Col5a1O88207 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Col5a1O88207 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Col5a1O88207 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col5a1O88207 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col5a1O88207 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.25□□□□□ -0.45
Col5a1O88207 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC12.25□□□□□ -0.45
Col5a1O88207 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Col5a1O88207 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Mir5120-201ENSMUST00000175020 78 ntBASIC12.25□□□□□ -0.45
Col5a1O88207 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.25□□□□□ -0.45
Col5a1O88207 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.25□□□□□ -0.45
Col5a1O88207 Gm7046-201ENSMUST00000221351 977 ntBASIC12.25□□□□□ -0.45
Col5a1O88207 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.25□□□□□ -0.45
Col5a1O88207 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.25□□□□□ -0.45
Col5a1O88207 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col5a1O88207 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Gm16479-201ENSMUST00000121706 932 ntBASIC12.25□□□□□ -0.45
Col5a1O88207 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.25□□□□□ -0.45
Col5a1O88207 Gm25668-201ENSMUST00000157700 129 ntBASIC12.25□□□□□ -0.45
Col5a1O88207 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.25□□□□□ -0.45
Col5a1O88207 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.25□□□□□ -0.45
Col5a1O88207 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.25□□□□□ -0.45
Col5a1O88207 Gm10608-202ENSMUST00000213924 676 ntBASIC12.25□□□□□ -0.45
Col5a1O88207 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col5a1O88207 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Col5a1O88207 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.24□□□□□ -0.45
Col5a1O88207 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms