Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr1O70481 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.57■□□□□ 0.4
Ubr1O70481 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ubr1O70481 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr1O70481 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr1O70481 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr1O70481 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr1O70481 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr1O70481 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubr1O70481 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ubr1O70481 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Ubr1O70481 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ubr1O70481 Gm15808-201ENSMUST00000119046 604 ntBASIC17.56■□□□□ 0.4
Ubr1O70481 Gm11964-201ENSMUST00000120982 444 ntBASIC17.56■□□□□ 0.4
Ubr1O70481 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.56■□□□□ 0.4
Ubr1O70481 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.56■□□□□ 0.4
Ubr1O70481 Gm19163-201ENSMUST00000223313 780 ntBASIC17.56■□□□□ 0.4
Ubr1O70481 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ubr1O70481 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ubr1O70481 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ubr1O70481 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Gm21769-201ENSMUST00000211922 111 ntBASIC17.56■□□□□ 0.4
Ubr1O70481 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.56■□□□□ 0.4
Ubr1O70481 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Ubr1O70481 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubr1O70481 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Ubr1O70481 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubr1O70481 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ubr1O70481 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Ubr1O70481 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.55■□□□□ 0.4
Ubr1O70481 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Ubr1O70481 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ubr1O70481 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubr1O70481 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ubr1O70481 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubr1O70481 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.55■□□□□ 0.4
Ubr1O70481 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC17.54■□□□□ 0.4
Ubr1O70481 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC17.54■□□□□ 0.4
Ubr1O70481 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Ubr1O70481 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ubr1O70481 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ubr1O70481 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ubr1O70481 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubr1O70481 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.53■□□□□ 0.4
Ubr1O70481 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubr1O70481 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC17.53■□□□□ 0.4
Ubr1O70481 Gm18056-201ENSMUST00000207670 568 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 Gm18061-201ENSMUST00000208350 562 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 Gm18063-201ENSMUST00000208529 568 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 Gm18052-201ENSMUST00000208750 559 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.53■□□□□ 0.4
Ubr1O70481 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ubr1O70481 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms