Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Gm5866-201ENSMUST00000177881 973 ntBASIC13.64□□□□□ -0.23
Pdlim1O70400 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Gm5354-201ENSMUST00000182417 973 ntBASIC13.64□□□□□ -0.23
Pdlim1O70400 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.64□□□□□ -0.23
Pdlim1O70400 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim1O70400 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pdlim1O70400 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.63□□□□□ -0.23
Pdlim1O70400 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Gm6218-201ENSMUST00000219812 628 ntBASIC13.63□□□□□ -0.23
Pdlim1O70400 Gm19220-201ENSMUST00000222682 803 ntBASIC13.63□□□□□ -0.23
Pdlim1O70400 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.63□□□□□ -0.23
Pdlim1O70400 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.63□□□□□ -0.23
Pdlim1O70400 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim1O70400 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Pdlim1O70400 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pdlim1O70400 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms