Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.13■□□□□ 0.01
Trdmt1O55055 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.13■□□□□ 0.01
Trdmt1O55055 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.13■□□□□ 0.01
Trdmt1O55055 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trdmt1O55055 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdmt1O55055 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trdmt1O55055 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trdmt1O55055 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trdmt1O55055 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trdmt1O55055 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.12■□□□□ 0.01
Trdmt1O55055 Gm37497-201ENSMUST00000195830 798 ntBASIC15.12■□□□□ 0.01
Trdmt1O55055 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.12■□□□□ 0.01
Trdmt1O55055 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.12■□□□□ 0.01
Trdmt1O55055 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.12■□□□□ 0.01
Trdmt1O55055 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.12■□□□□ 0.01
Trdmt1O55055 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.12■□□□□ 0.01
Trdmt1O55055 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trdmt1O55055 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdmt1O55055 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.11■□□□□ 0.01
Trdmt1O55055 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.11■□□□□ 0.01
Trdmt1O55055 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Gm37008-201ENSMUST00000195712 319 ntBASIC15.11■□□□□ 0.01
Trdmt1O55055 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trdmt1O55055 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.11■□□□□ 0.01
Trdmt1O55055 Snora73a-201ENSMUST00000082453 205 ntBASIC15.11■□□□□ 0.01
Trdmt1O55055 Gm10268-201ENSMUST00000085340 555 ntBASIC15.11■□□□□ 0.01
Trdmt1O55055 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trdmt1O55055 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trdmt1O55055 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdmt1O55055 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.11■□□□□ 0.01
Trdmt1O55055 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.1■□□□□ 0.01
Trdmt1O55055 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trdmt1O55055 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.1■□□□□ 0.01
Trdmt1O55055 Gm14723-201ENSMUST00000118686 215 ntBASIC15.1■□□□□ 0.01
Trdmt1O55055 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trdmt1O55055 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdmt1O55055 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms