Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col15a1O35206 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col15a1O35206 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Col15a1O35206 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.5■□□□□ 0.39
Col15a1O35206 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.5■□□□□ 0.39
Col15a1O35206 Gm7809-201ENSMUST00000153199 742 ntBASIC17.5■□□□□ 0.39
Col15a1O35206 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.5■□□□□ 0.39
Col15a1O35206 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col15a1O35206 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col15a1O35206 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.5■□□□□ 0.39
Col15a1O35206 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.5■□□□□ 0.39
Col15a1O35206 Gm10608-202ENSMUST00000213924 676 ntBASIC17.5■□□□□ 0.39
Col15a1O35206 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.5■□□□□ 0.39
Col15a1O35206 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col15a1O35206 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.5■□□□□ 0.39
Col15a1O35206 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col15a1O35206 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col15a1O35206 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.49■□□□□ 0.39
Col15a1O35206 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.49■□□□□ 0.39
Col15a1O35206 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col15a1O35206 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col15a1O35206 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col15a1O35206 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Gm9431-201ENSMUST00000119765 1051 ntBASIC17.49■□□□□ 0.39
Col15a1O35206 Gm13297-201ENSMUST00000120205 934 ntBASIC17.49■□□□□ 0.39
Col15a1O35206 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Gm29199-201ENSMUST00000187766 775 ntBASIC17.49■□□□□ 0.39
Col15a1O35206 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.49■□□□□ 0.39
Col15a1O35206 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.49■□□□□ 0.39
Col15a1O35206 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.49■□□□□ 0.39
Col15a1O35206 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col15a1O35206 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.49■□□□□ 0.39
Col15a1O35206 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col15a1O35206 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col15a1O35206 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.48■□□□□ 0.39
Col15a1O35206 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.48■□□□□ 0.39
Col15a1O35206 Gm16479-201ENSMUST00000121706 932 ntBASIC17.48■□□□□ 0.39
Col15a1O35206 Gm2231-201ENSMUST00000125661 612 ntBASIC17.48■□□□□ 0.39
Col15a1O35206 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC17.48■□□□□ 0.39
Col15a1O35206 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.48■□□□□ 0.39
Col15a1O35206 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.48■□□□□ 0.39
Col15a1O35206 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col15a1O35206 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col15a1O35206 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.47■□□□□ 0.39
Col15a1O35206 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Col15a1O35206 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.47■□□□□ 0.39
Col15a1O35206 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col15a1O35206 Gm15370-201ENSMUST00000117158 253 ntBASIC17.47■□□□□ 0.39
Col15a1O35206 Gm12363-201ENSMUST00000122250 668 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms