Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trove2O08848 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trove2O08848 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trove2O08848 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trove2O08848 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trove2O08848 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.19□□□□□ -0.14
Trove2O08848 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trove2O08848 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trove2O08848 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trove2O08848 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.18□□□□□ -0.14
Trove2O08848 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trove2O08848 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trove2O08848 Gm14494-201ENSMUST00000118786 435 ntBASIC14.18□□□□□ -0.14
Trove2O08848 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.18□□□□□ -0.14
Trove2O08848 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Gm8000-201ENSMUST00000188378 592 ntBASIC14.18□□□□□ -0.14
Trove2O08848 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.18□□□□□ -0.14
Trove2O08848 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.18□□□□□ -0.14
Trove2O08848 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.18□□□□□ -0.14
Trove2O08848 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trove2O08848 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trove2O08848 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trove2O08848 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.17□□□□□ -0.14
Trove2O08848 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trove2O08848 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trove2O08848 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trove2O08848 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trove2O08848 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Trove2O08848 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Trove2O08848 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.17□□□□□ -0.14
Trove2O08848 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Gm43514-201ENSMUST00000198852 424 ntBASIC14.17□□□□□ -0.14
Trove2O08848 Gm9182-201ENSMUST00000217829 639 ntBASIC14.17□□□□□ -0.14
Trove2O08848 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.17□□□□□ -0.14
Trove2O08848 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trove2O08848 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trove2O08848 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trove2O08848 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trove2O08848 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trove2O08848 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trove2O08848 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trove2O08848 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Trove2O08848 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trove2O08848 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms