Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Gm38241-201ENSMUST00000192641 898 ntBASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Gm7783-201ENSMUST00000204795 781 ntBASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Gm26083-201ENSMUST00000157904 193 ntBASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Gm7895-201ENSMUST00000187459 1173 ntBASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC20.55■□□□□ 0.88
Pcf11G3X9Z4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Gm6161-201ENSMUST00000121942 1102 ntBASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Gm6254-201ENSMUST00000168178 1072 ntBASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Gm6153-201ENSMUST00000172004 1058 ntBASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Gm5641-202ENSMUST00000198699 1080 ntBASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 AC154171.1-201ENSMUST00000224610 643 ntBASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcf11G3X9Z4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Gm37133-201ENSMUST00000192705 1922 ntBASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Gm16379-201ENSMUST00000161469 348 ntBASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Gm8762-201ENSMUST00000193486 339 ntBASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcf11G3X9Z4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Gm38266-201ENSMUST00000194931 421 ntBASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Gm7046-201ENSMUST00000221351 977 ntBASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 CT485787.1-201ENSMUST00000225617 968 ntBASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms