Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Gm18622-201ENSMUST00000219361 595 ntBASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Gm44487-201ENSMUST00000205145 325 ntBASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Gm7461-201ENSMUST00000058918 827 ntBASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim55G3X8Y1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim55G3X8Y1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Gm10499-201ENSMUST00000174094 934 ntBASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trim55G3X8Y1 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim55G3X8Y1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms