Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Gm6916-202ENSMUST00000205523 195 ntBASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Gm8396-201ENSMUST00000057361 823 ntBASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Gm10253-201ENSMUST00000194270 940 ntBASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Mir497b-201ENSMUST00000093601 125 ntBASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh9F8VPK8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Gm14701-201ENSMUST00000117156 348 ntBASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Gm7774-201ENSMUST00000200064 533 ntBASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh9F8VPK8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.15□□□□□ -0.15
Pcdh9F8VPK8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms