Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Atf6F6VAN0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Gm13223-201ENSMUST00000118609 747 ntBASIC14.19□□□□□ -0.14
Atf6F6VAN0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atf6F6VAN0 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.19□□□□□ -0.14
Atf6F6VAN0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf6F6VAN0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.18□□□□□ -0.14
Atf6F6VAN0 Gm27680-201ENSMUST00000184192 160 ntBASIC14.18□□□□□ -0.14
Atf6F6VAN0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.18□□□□□ -0.14
Atf6F6VAN0 Gm43703-201ENSMUST00000200523 763 ntBASIC14.18□□□□□ -0.14
Atf6F6VAN0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Atf6F6VAN0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.17□□□□□ -0.14
Atf6F6VAN0 Gm13453-201ENSMUST00000118708 357 ntBASIC14.17□□□□□ -0.14
Atf6F6VAN0 Gm15393-201ENSMUST00000120499 219 ntBASIC14.17□□□□□ -0.14
Atf6F6VAN0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Gm3436-201ENSMUST00000179930 840 ntBASIC14.17□□□□□ -0.14
Atf6F6VAN0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6F6VAN0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms