Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube4aE9Q735 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Gm4271-201ENSMUST00000174444 973 ntBASIC16.49■□□□□ 0.23
Ube4aE9Q735 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.49■□□□□ 0.23
Ube4aE9Q735 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube4aE9Q735 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Gm5370-201ENSMUST00000187187 574 ntBASIC16.48■□□□□ 0.23
Ube4aE9Q735 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.48■□□□□ 0.23
Ube4aE9Q735 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.48■□□□□ 0.23
Ube4aE9Q735 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube4aE9Q735 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.47■□□□□ 0.23
Ube4aE9Q735 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.47■□□□□ 0.23
Ube4aE9Q735 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms