Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Mir6941-201ENSMUST00000184711 59 ntBASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Gm45120-201ENSMUST00000208880 408 ntBASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Snora73b-201ENSMUST00000083419 205 ntBASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Gm25043-201ENSMUST00000158604 212 ntBASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a3E9PWQ3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Gm7904-201ENSMUST00000217049 465 ntBASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col6a3E9PWQ3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Gm23251-201ENSMUST00000103773 110 ntBASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Gm17812-201ENSMUST00000204935 318 ntBASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a3E9PWQ3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a3E9PWQ3 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms