Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-2D3Z4R4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-2D3Z4R4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-2D3Z4R4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Gm13312-201ENSMUST00000119631 718 ntBASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Gm9013-201ENSMUST00000132939 882 ntBASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Gm37055-201ENSMUST00000191866 133 ntBASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-2D3Z4R4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Mir770-201ENSMUST00000103252 94 ntBASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Rprl3-201ENSMUST00000157400 290 ntBASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Gm22240-201ENSMUST00000175225 82 ntBASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Gm8318-201ENSMUST00000182954 872 ntBASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-2D3Z4R4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-2D3Z4R4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-2D3Z4R4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-2D3Z4R4 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.15□□□□□ -0.63
Nkx6-2D3Z4R4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-2D3Z4R4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-2D3Z4R4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-2D3Z4R4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms