Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.36□□□□□ -0.43
Shank1D3YZU1 Gm29705-201ENSMUST00000212598 474 ntBASIC12.36□□□□□ -0.43
Shank1D3YZU1 Gm45880-201ENSMUST00000213041 853 ntBASIC12.36□□□□□ -0.43
Shank1D3YZU1 Gm19309-201ENSMUST00000218295 205 ntBASIC12.36□□□□□ -0.43
Shank1D3YZU1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.36□□□□□ -0.43
Shank1D3YZU1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Gm15808-201ENSMUST00000119046 604 ntBASIC12.36□□□□□ -0.43
Shank1D3YZU1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.36□□□□□ -0.43
Shank1D3YZU1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.35□□□□□ -0.43
Shank1D3YZU1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Gm4271-201ENSMUST00000174444 973 ntBASIC12.35□□□□□ -0.43
Shank1D3YZU1 Gm29199-201ENSMUST00000187766 775 ntBASIC12.35□□□□□ -0.43
Shank1D3YZU1 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.35□□□□□ -0.43
Shank1D3YZU1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.35□□□□□ -0.43
Shank1D3YZU1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Gm8213-201ENSMUST00000118191 441 ntBASIC12.35□□□□□ -0.43
Shank1D3YZU1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Gm43818-201ENSMUST00000200605 466 ntBASIC12.35□□□□□ -0.43
Shank1D3YZU1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms