Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chd3B1AR17 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd3B1AR17 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm12134-201ENSMUST00000122109 520 ntBASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.49□□□□□ -0.25
Chd3B1AR17 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.49□□□□□ -0.25
Chd3B1AR17 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Chd3B1AR17 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd3B1AR17 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chd3B1AR17 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.48□□□□□ -0.25
Chd3B1AR17 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Gm15429-201ENSMUST00000151268 798 ntBASIC13.48□□□□□ -0.25
Chd3B1AR17 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chd3B1AR17 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd3B1AR17 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chd3B1AR17 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.47□□□□□ -0.25
Chd3B1AR17 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Chd3B1AR17 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd3B1AR17 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.46□□□□□ -0.25
Chd3B1AR17 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chd3B1AR17 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.46□□□□□ -0.25
Chd3B1AR17 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms