Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Gm7003-201ENSMUST00000195089 312 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 Gm5781-201ENSMUST00000219792 443 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.06□□□□□ -0.64
Chd6A3KFM7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd6A3KFM7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm45527-201ENSMUST00000211052 774 ntBASIC11.05□□□□□ -0.64
Chd6A3KFM7 Mt1-202ENSMUST00000211807 1085 ntBASIC11.05□□□□□ -0.64
Chd6A3KFM7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.05□□□□□ -0.64
Chd6A3KFM7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm9062-201ENSMUST00000117712 727 ntBASIC11.05□□□□□ -0.64
Chd6A3KFM7 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm25072-201ENSMUST00000175233 235 ntBASIC11.05□□□□□ -0.64
Chd6A3KFM7 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Gm14005-208ENSMUST00000223654 681 ntBASIC11.05□□□□□ -0.64
Chd6A3KFM7 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd6A3KFM7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chd6A3KFM7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gm13123-201ENSMUST00000122173 492 ntBASIC11.04□□□□□ -0.64
Chd6A3KFM7 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gm18734-201ENSMUST00000172937 808 ntBASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gm8492-201ENSMUST00000182375 987 ntBASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gm19287-201ENSMUST00000203190 358 ntBASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gm44262-201ENSMUST00000204969 372 ntBASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.04□□□□□ -0.64
Chd6A3KFM7 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.04□□□□□ -0.64
Chd6A3KFM7 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd6A3KFM7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms