Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.64□□□□□ -0.55
Col6a4A2AX52 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.64□□□□□ -0.55
Col6a4A2AX52 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Gm18473-201ENSMUST00000220543 868 ntBASIC11.64□□□□□ -0.55
Col6a4A2AX52 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.64□□□□□ -0.55
Col6a4A2AX52 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.64□□□□□ -0.55
Col6a4A2AX52 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.64□□□□□ -0.55
Col6a4A2AX52 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.64□□□□□ -0.55
Col6a4A2AX52 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm29705-201ENSMUST00000212598 474 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm12241-201ENSMUST00000118330 726 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm13342-201ENSMUST00000121055 207 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm29199-201ENSMUST00000187766 775 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm6334-201ENSMUST00000207083 228 ntBASIC11.63□□□□□ -0.55
Col6a4A2AX52 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col6a4A2AX52 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.62□□□□□ -0.55
Col6a4A2AX52 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Gm12882-201ENSMUST00000121696 517 ntBASIC11.62□□□□□ -0.55
Col6a4A2AX52 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms