Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn1aA2APX8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm13612-201ENSMUST00000119276 390 ntBASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.36□□□□□ -0.11
Scn1aA2APX8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.36□□□□□ -0.11
Scn1aA2APX8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm15806-201ENSMUST00000120696 955 ntBASIC14.36□□□□□ -0.11
Scn1aA2APX8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm43433-201ENSMUST00000196573 481 ntBASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn1aA2APX8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.35□□□□□ -0.11
Scn1aA2APX8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.35□□□□□ -0.11
Scn1aA2APX8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Gm14350-201ENSMUST00000116642 640 ntBASIC14.35□□□□□ -0.11
Scn1aA2APX8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Gm24644-201ENSMUST00000157114 139 ntBASIC14.35□□□□□ -0.11
Scn1aA2APX8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Gm6266-201ENSMUST00000203844 806 ntBASIC14.35□□□□□ -0.11
Scn1aA2APX8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn1aA2APX8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.34□□□□□ -0.11
Scn1aA2APX8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.34□□□□□ -0.11
Scn1aA2APX8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm42550-201ENSMUST00000201553 960 ntBASIC14.34□□□□□ -0.11
Scn1aA2APX8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn1aA2APX8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms