Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav12-1A0N8R1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav12-1A0N8R1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav12-1A0N8R1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav12-1A0N8R1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav12-1A0N8R1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav12-1A0N8R1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gm25287-201ENSMUST00000103846 110 ntBASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gm22918-201ENSMUST00000103855 110 ntBASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gm5566-201ENSMUST00000116118 459 ntBASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gm18889-201ENSMUST00000174284 929 ntBASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gm9824-201ENSMUST00000178707 561 ntBASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gm27494-201ENSMUST00000184735 189 ntBASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav12-1A0N8R1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Gm11779-201ENSMUST00000118541 368 ntBASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav12-1A0N8R1 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms